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Cosmic medallion portrait of GRLS_grls4PEV98TT, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grls4PEV98TT

GRLS_grls4PEV98TT is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grls4PEV98TT in the atlas
About GRLS_grls4PEV98TT

GRLS_grls4PEV98TT sits near the center of the Golden Retriever cluster - genetically very typical for the breed.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
GRLS_grls4PEV98TT's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grls4PEV98TT's. Click any of them to keep exploring.

  1. GRLS_grlsZSMLMUPP Golden Retriever 29.56
  2. GRLS_grlsVX7VGDWW Golden Retriever 29.57
  3. GRLS_grlsPJLBR00 Golden Retriever 29.64
  4. GRLS_grlsI0K4H6II Golden Retriever 29.68
  5. GRLS_grlsMMKSTLL Golden Retriever 29.81
GRLS_grls4PEV98TT's breed

GRLS_grls4PEV98TT sits firmly in the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 A/A
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.108
y 10.379
z 8.069
PCA-256 distance from breed centroid
23.52
Outlier percentile in breed
0
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grls4PEV98TT scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC120 z = -2.51
  • chr3:1,222,422 loading 0.0435
  • chr34:3,128,578 loading 0.0397
  • chr34:1,919,265 loading -0.0396
PC246 z = 2.21
  • chr4:78,506,139 loading 0.0305
  • chr26:20,960,217 loading -0.0303
  • chr22:28,657,814 loading -0.0289
PC130 z = 2.04
  • chr6:33,386,202 loading 0.0387
  • chr6:30,876,588 loading 0.0376
  • chr6:30,769,727 loading -0.0372
Ancestry reconstruction error: 0.46
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