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Cosmic medallion portrait of GRLS_grlsC0EX4933, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsC0EX4933

GRLS_grlsC0EX4933 is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsC0EX4933 in the atlas
About GRLS_grlsC0EX4933

GRLS_grlsC0EX4933 sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
GRLS_grlsC0EX4933's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsC0EX4933's. Click any of them to keep exploring.

  1. GRLS_grlsYPP94SII Golden Retriever 26.91
  2. GRLS_grls4NXSGXTT Golden Retriever 36.57
  3. GRLS_grlsHMI6LJKK Golden Retriever 37.01
  4. GRLS_grlsMOCF0544 Golden Retriever 37.72
  5. GRLS_grlsSYG7XR99 Golden Retriever 38.44
GRLS_grlsC0EX4933's breed

GRLS_grlsC0EX4933 sits firmly in the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.182
y 9.618
z 8.428
PCA-256 distance from breed centroid
39.18
Outlier percentile in breed
73
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsC0EX4933 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC150 z = 4.11
  • chr18:2,954,407 loading 0.0354
  • chr4:9,808,812 loading -0.0348
  • chr24:4,114,956 loading 0.0343
PC110 z = -3.49
  • chr25:1,742,133 loading 0.0401
  • chr28:2,607,542 loading 0.0393
  • chr25:1,819,027 loading 0.0392
PC216 z = -2.96
  • chr6:57,387,289 loading 0.0303
  • chr14:13,904,420 loading -0.0294
  • chr30:3,709,721 loading 0.0293
Ancestry reconstruction error: 0.60
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