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Cosmic medallion portrait of GRLS_grlsIG55M1RR, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsIG55M1RR

GRLS_grlsIG55M1RR is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsIG55M1RR in the atlas
About GRLS_grlsIG55M1RR

GRLS_grlsIG55M1RR sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
GRLS_grlsIG55M1RR's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsIG55M1RR's. Click any of them to keep exploring.

  1. GRLS_grlsLWVGDNDD Golden Retriever 22.70
  2. GRLS_grlsPTSB3DRR Golden Retriever 23.18
  3. GRLS_grls91PMDXLL Golden Retriever 28.51
  4. GRLS_grlsBKWLR0SS Golden Retriever 28.91
  5. GRLS_grlsXPMOLOFF Golden Retriever 30.18
GRLS_grlsIG55M1RR's breed

GRLS_grlsIG55M1RR sits firmly in the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 C/T
SMAD2 A/G
LCORL G/G
STC2 C/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.182
y 9.997
z 7.712
PCA-256 distance from breed centroid
36.88
Outlier percentile in breed
63
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsIG55M1RR scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC124 z = -3.87
  • chr15:20,177,951 loading 0.0387
  • chr13:4,444,829 loading 0.0366
  • chr15:20,737,839 loading -0.0362
PC108 z = -3.19
  • chr7:42,690,827 loading 0.0435
  • chr21:34,428,857 loading -0.0342
  • chr34:4,429,712 loading -0.0326
PC119 z = 2.95
  • chr24:2,576,794 loading 0.0370
  • chr6:3,625,190 loading 0.0350
  • chr6:3,210,008 loading -0.0323
Ancestry reconstruction error: 0.60
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