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Cosmic medallion portrait of GRLS_grlsQTDV5HZZ, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsQTDV5HZZ

GRLS_grlsQTDV5HZZ is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsQTDV5HZZ in the atlas
About GRLS_grlsQTDV5HZZ

GRLS_grlsQTDV5HZZ sits well inside the Golden Retriever cluster - a fairly typical example.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
GRLS_grlsQTDV5HZZ's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsQTDV5HZZ's. Click any of them to keep exploring.

  1. GRLS_grlsLMT31QII Golden Retriever 22.97
  2. GRLS_grls6XAJBBKK Golden Retriever 28.88
  3. PILOT_grlsRQDEUU Golden Retriever 31.23
  4. GRLS_grlsJNBT5M66 Golden Retriever 32.45
  5. GRLS_grlsDUFB6REE Golden Retriever 34.07
GRLS_grlsQTDV5HZZ's breed

GRLS_grlsQTDV5HZZ sits firmly in the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.710
y 10.637
z 7.753
PCA-256 distance from breed centroid
33.38
Outlier percentile in breed
44
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsQTDV5HZZ scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC142 z = 2.59
  • chr23:22,412,099 loading 0.0339
  • chr12:15,112,297 loading -0.0336
  • chr12:4,421,359 loading 0.0318
PC87 z = -2.59
  • chr18:17,740,291 loading 0.0425
  • chr18:13,022,424 loading -0.0364
  • chr18:14,917,450 loading -0.0361
PC177 z = 2.52
  • chr12:606,598 loading 0.0433
  • chr12:4,288,226 loading -0.0385
  • chr12:1,150,085 loading 0.0383
Ancestry reconstruction error: 0.59
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