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GRLS Hero Oldie · Founder
Cosmic medallion portrait of Oldies_grls2ed8a60b, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

Oldies_grls2ed8a60b

Oldies_grls2ed8a60b is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See Oldies_grls2ed8a60b in the atlas
About Oldies_grls2ed8a60b

Oldies_grls2ed8a60b sits well inside the Golden Retriever cluster - a fairly typical example.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
Oldies_grls2ed8a60b's nearest neighbors

The five dogs in the atlas whose genomes sit closest to Oldies_grls2ed8a60b's. Click any of them to keep exploring.

  1. GRLS_grlsTYR5PO55 Golden Retriever 29.85
  2. PILOT_grlsTTQ4VJ33 Golden Retriever 33.19
  3. GRLS_grlsEGYPXK44 Golden Retriever 35.06
  4. GRLS_grlsQF6BJEQQ Golden Retriever 35.72
  5. GRLS_grls7EDP799 Golden Retriever 36.18
Oldies_grls2ed8a60b's breed

Oldies_grls2ed8a60b sits firmly in the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.713
y 10.008
z 8.046
PCA-256 distance from breed centroid
34.12
Outlier percentile in breed
48
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which Oldies_grls2ed8a60b scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC97 z = 3.55
  • chr15:42,263,341 loading 0.0348
  • chr18:11,175,691 loading -0.0320
  • chr1:63,849,832 loading 0.0318
PC184 z = -2.99
  • chr21:19,144,029 loading 0.0303
  • chr13:28,713,034 loading -0.0303
  • chr15:5,912,708 loading 0.0300
PC206 z = 2.86
  • chr7:42,935,741 loading 0.0386
  • chr19:34,609,563 loading -0.0356
  • chr30:22,656,587 loading 0.0321
Ancestry reconstruction error: 0.58
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