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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ37B10_PFZ37B10, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ37B10_PFZ37B10

PFZ37B10_PFZ37B10 is a Golden Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ37B10_PFZ37B10 in the atlas
About PFZ37B10_PFZ37B10

PFZ37B10_PFZ37B10 sits near the center of the Golden Retriever cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ37B10_PFZ37B10's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ37B10_PFZ37B10's. Click any of them to keep exploring.

  1. GRLS_grls02RRJK88 Golden Retriever 28.82
  2. GRLS_grlsTCDZZ655 Golden Retriever 28.84
  3. GRLS_grlsI4KWZ2ZZ Golden Retriever 29.21
  4. GRLS_grlsVX7VGDWW Golden Retriever 29.26
  5. PILOT_grlsTVVWBM66 Golden Retriever 29.36
PFZ37B10_PFZ37B10's breed

PFZ37B10_PFZ37B10 sits firmly in the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.718
y 10.698
z 7.929
PCA-256 distance from breed centroid
24.73
Outlier percentile in breed
1
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ37B10_PFZ37B10 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC189 z = 2.60
  • chr11:28,721,751 loading 0.0412
  • chr14:3,689,618 loading -0.0355
  • chr11:17,928,935 loading -0.0339
PC198 z = -2.58
  • chr2:48,735,597 loading 0.0380
  • chr23:1,924,139 loading -0.0317
  • chr23:1,615,600 loading -0.0317
PC158 z = 2.42
  • chr1:69,893,718 loading 0.0314
  • chr1:64,453,595 loading -0.0313
  • chr8:29,102,271 loading -0.0309
Ancestry reconstruction error: 0.49
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