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CanVAS Shannon · Founder
Cosmic medallion portrait of PFZ40G02_PFZ40G02, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ40G02_PFZ40G02

PFZ40G02_PFZ40G02 is a Golden Retriever from the Shannon research cohort. One of 14,478 dogs who built the atlas.

See PFZ40G02_PFZ40G02 in the atlas
About PFZ40G02_PFZ40G02

PFZ40G02_PFZ40G02 sits well inside the Golden Retriever cluster - a fairly typical example.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ40G02_PFZ40G02's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ40G02_PFZ40G02's. Click any of them to keep exploring.

  1. PFZ41H11_PFZ41H11 Golden Retriever 22.55
  2. PFZ41D11_PFZ41D11 Golden Retriever 23.73
  3. GRLS_grls81TX7QQQ Golden Retriever 26.71
  4. GRLS_grls740BUXXX Golden Retriever 27.10
  5. PFZ43E08_PFZ43E08 Golden Retriever 28.61
PFZ40G02_PFZ40G02's breed

PFZ40G02_PFZ40G02 sits firmly in the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the CanVAS (Shannon cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 G/G
LCORL A/G
STC2 C/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 6.275
y 11.001
z 7.819
PCA-256 distance from breed centroid
31.91
Outlier percentile in breed
37
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ40G02_PFZ40G02 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC19 z = -3.19
  • chr36:5,342,283 loading 0.0327
  • chr3:69,391,244 loading 0.0300
  • chr25:17,826,837 loading -0.0278
PC251 z = 2.61
  • chr25:40,121,397 loading 0.0326
  • chr28:17,013,099 loading 0.0310
  • chr26:15,170,564 loading 0.0302
PC179 z = -2.27
  • chr34:3,531,310 loading 0.0341
  • chr34:3,128,578 loading -0.0327
  • chr4:57,360,298 loading -0.0326
Ancestry reconstruction error: 0.62
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