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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ7H05_PFZ7H05, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ7H05_PFZ7H05

PFZ7H05_PFZ7H05 is a Golden Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ7H05_PFZ7H05 in the atlas
About PFZ7H05_PFZ7H05

PFZ7H05_PFZ7H05 sits well inside the Golden Retriever cluster - a fairly typical example.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ7H05_PFZ7H05's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ7H05_PFZ7H05's. Click any of them to keep exploring.

  1. GRLS_grls2IKW1P88 Golden Retriever 31.47
  2. GRLS_grls92KYJ99 Golden Retriever 33.52
  3. GRLS_grlsC78EUT77 Golden Retriever 33.88
  4. GRLS_grlsG1R4BEII Golden Retriever 34.13
  5. PFZ7D08_PFZ7D08 Golden Retriever 34.16
PFZ7H05_PFZ7H05's breed

PFZ7H05_PFZ7H05 sits firmly in the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.692
y 9.867
z 8.103
PCA-256 distance from breed centroid
31.16
Outlier percentile in breed
33
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ7H05_PFZ7H05 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC218 z = -2.94
  • chr7:62,094,557 loading 0.0330
  • chr17:4,233,511 loading -0.0324
  • chr28:21,567,516 loading 0.0320
PC180 z = 2.53
  • chr25:3,195,036 loading 0.0485
  • chr25:4,418,784 loading -0.0459
  • chr25:3,349,555 loading 0.0401
PC206 z = -2.29
  • chr7:42,935,741 loading 0.0386
  • chr19:34,609,563 loading -0.0356
  • chr30:22,656,587 loading 0.0321
Ancestry reconstruction error: 0.56
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