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Cosmic medallion portrait of PILOT_grlsPFK771GG, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PILOT_grlsPFK771GG

PILOT_grlsPFK771GG is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See PILOT_grlsPFK771GG in the atlas
About PILOT_grlsPFK771GG

PILOT_grlsPFK771GG sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PILOT_grlsPFK771GG's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PILOT_grlsPFK771GG's. Click any of them to keep exploring.

  1. GRLS_grlsUJ831IPP Golden Retriever 21.50
  2. PILOT_grlsM4THSXHH Golden Retriever 30.19
  3. GRLS_grls4QMUYS99 Golden Retriever 30.41
  4. GRLS_grlsCSRZJ566 Golden Retriever 33.40
  5. GRLS_grls27Z1P2NN Golden Retriever 33.41
PILOT_grlsPFK771GG's breed

PILOT_grlsPFK771GG sits firmly in the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.570
y 10.348
z 9.148
PCA-256 distance from breed centroid
36.03
Outlier percentile in breed
58
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PILOT_grlsPFK771GG scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC53 z = -4.48
  • chr1:72,254,803 loading 0.0346
  • chr1:70,825,780 loading 0.0344
  • chr14:9,177,180 loading 0.0335
PC49 z = 3.76
  • chr22:1,808,281 loading 0.0358
  • chr1:70,511,608 loading 0.0354
  • chr22:2,157,682 loading 0.0341
PC146 z = -3.34
  • chr2:41,835,446 loading 0.0357
  • chr2:40,086,289 loading 0.0341
  • chr22:28,657,814 loading -0.0335
Ancestry reconstruction error: 0.58
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