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CanVAS Parker · Founder
Cosmic medallion portrait of GOLD_GRe_0GT212, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GOLD_GRe_0GT212

GOLD_GRe_0GT212 is a Golden Retriever from the Parker research cohort. One of 14,478 dogs who built the atlas.

See GOLD_GRe_0GT212 in the atlas
About GOLD_GRe_0GT212

GOLD_GRe_0GT212 is a notable Golden Retriever - distinctive within the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
GOLD_GRe_0GT212's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GOLD_GRe_0GT212's. Click any of them to keep exploring.

  1. GRe_GT212_GRe_GT212 Golden Retriever 1.03
  2. GRLS_grls9FFL6MEE Golden Retriever 29.24
  3. GRLS_grlsQB7DQ0OO Golden Retriever 29.58
  4. GRLS_grlsNLCY6W88 Golden Retriever 29.62
  5. GRLS_grlsJ6NBWSJJ Golden Retriever 30.52
GOLD_GRe_0GT212's breed

GOLD_GRe_0GT212 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 81%
  2. Labrador Retriever 19%
Source

From the CanVAS (Parker cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.062
y 9.219
z 8.100
PCA-256 distance from breed centroid
40.40
Outlier percentile in breed
78
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GOLD_GRe_0GT212 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC161 z = -3.75
  • chr25:6,699,887 loading 0.0385
  • chr8:38,372,734 loading -0.0369
  • chr15:23,258,994 loading -0.0343
PC113 z = 3.17
  • chr22:17,237,143 loading 0.0474
  • chr22:17,327,096 loading 0.0458
  • chr1:53,531,199 loading 0.0436
PC249 z = 3.07
  • chr6:30,830,915 loading 0.0329
  • chr1:22,842,587 loading 0.0316
  • chr7:61,438,680 loading -0.0291
Ancestry reconstruction error: 0.63
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