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Cosmic medallion portrait of GRLS_grls1C3AZ244, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grls1C3AZ244

GRLS_grls1C3AZ244 is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grls1C3AZ244 in the atlas
About GRLS_grls1C3AZ244

GRLS_grls1C3AZ244 sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
GRLS_grls1C3AZ244's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grls1C3AZ244's. Click any of them to keep exploring.

  1. GRLS_grlsDCRPXGMM Golden Retriever 26.25
  2. GRLS_grlsZJD8DKEE Golden Retriever 33.99
  3. GRLS_grls8YZZ2XSS Golden Retriever 34.21
  4. Oldies_grlsdf2ca578 Golden Retriever 34.37
  5. GRLS_grlsCZWY5277 Golden Retriever 34.51
GRLS_grls1C3AZ244's breed

GRLS_grls1C3AZ244 sits firmly in the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.195
y 9.470
z 7.802
PCA-256 distance from breed centroid
35.16
Outlier percentile in breed
53
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grls1C3AZ244 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC66 z = -4.61
  • chr22:1,996,400 loading 0.0426
  • chr22:1,969,643 loading -0.0423
  • chr22:2,473,315 loading 0.0395
PC209 z = -2.98
  • chr7:5,846,709 loading 0.0374
  • chr7:2,256,768 loading -0.0351
  • chr25:8,169,704 loading 0.0337
PC64 z = 2.58
  • chr8:38,372,734 loading 0.0317
  • chr23:20,107,050 loading 0.0304
  • chr23:19,874,668 loading -0.0292
Ancestry reconstruction error: 0.59
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