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GRLS Hero Oldie · Founder
Cosmic medallion portrait of Oldies_grlsdf2ca578, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

Oldies_grlsdf2ca578

Oldies_grlsdf2ca578 is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See Oldies_grlsdf2ca578 in the atlas
About Oldies_grlsdf2ca578

Oldies_grlsdf2ca578 sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
Oldies_grlsdf2ca578's nearest neighbors

The five dogs in the atlas whose genomes sit closest to Oldies_grlsdf2ca578's. Click any of them to keep exploring.

  1. GRLS_grlsIGPYD4ZZ Golden Retriever 31.33
  2. GRLS_grlsDCRPXGMM Golden Retriever 31.95
  3. GRLS_grls1C3AZ244 Golden Retriever 34.37
  4. GRLS_grlsNAR05OO Golden Retriever 34.41
  5. PFZ36A12_PFZ36A12 Golden Retriever 34.90
Oldies_grlsdf2ca578's breed

Oldies_grlsdf2ca578 sits firmly in the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.252
y 9.502
z 7.688
PCA-256 distance from breed centroid
37.92
Outlier percentile in breed
68
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which Oldies_grlsdf2ca578 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC66 z = -5.09
  • chr22:1,996,400 loading 0.0426
  • chr22:1,969,643 loading -0.0423
  • chr22:2,473,315 loading 0.0395
PC98 z = -3.19
  • chr1:70,040,058 loading 0.0369
  • chr1:99,414,793 loading -0.0351
  • chr24:7,157,643 loading 0.0343
PC155 z = -2.97
  • chr3:3,559,803 loading 0.0324
  • chr6:3,540,503 loading -0.0319
  • chr15:3,475,065 loading 0.0316
Ancestry reconstruction error: 0.60
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