Skip to main content
snıff
GRLS Hero · Founder
Cosmic medallion portrait of GRLS_grls2IHZPQSS, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grls2IHZPQSS

GRLS_grls2IHZPQSS is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grls2IHZPQSS in the atlas
About GRLS_grls2IHZPQSS

GRLS_grls2IHZPQSS sits well inside the Golden Retriever cluster - a fairly typical example.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
GRLS_grls2IHZPQSS's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grls2IHZPQSS's. Click any of them to keep exploring.

  1. GRLS_grlsMDS9V00 Golden Retriever 30.07
  2. GRLS_grlsNIYMY1TT Golden Retriever 30.84
  3. GRLS_grlsVK01J9LL Golden Retriever 32.46
  4. GRLS_grls3O8XTR88 Golden Retriever 32.56
  5. Oldies_grls63189b5b Golden Retriever 33.12
GRLS_grls2IHZPQSS's breed

GRLS_grls2IHZPQSS sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 80%
  2. Labrador Retriever 20%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.785
y 9.970
z 8.807
PCA-256 distance from breed centroid
32.80
Outlier percentile in breed
41
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grls2IHZPQSS scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC209 z = -3.14
  • chr7:5,846,709 loading 0.0374
  • chr7:2,256,768 loading -0.0351
  • chr25:8,169,704 loading 0.0337
PC97 z = -3.06
  • chr15:42,263,341 loading 0.0348
  • chr18:11,175,691 loading -0.0320
  • chr1:63,849,832 loading 0.0318
PC207 z = 2.75
  • chr13:666,991 loading 0.0347
  • chr25:4,215,319 loading -0.0336
  • chr18:33,604,976 loading 0.0307
Ancestry reconstruction error: 0.56
Back to the Atlas →