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Cosmic medallion portrait of GRLS_grls3U9JKEMM, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grls3U9JKEMM

GRLS_grls3U9JKEMM is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grls3U9JKEMM in the atlas
About GRLS_grls3U9JKEMM

GRLS_grls3U9JKEMM is a notable Golden Retriever - distinctive within the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
GRLS_grls3U9JKEMM's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grls3U9JKEMM's. Click any of them to keep exploring.

  1. GRLS_grls73WC42UU Golden Retriever 23.16
  2. GRLS_grlsG8XK3MII Golden Retriever 23.78
  3. GRLS_grlsKX7MJSS Golden Retriever 23.95
  4. GRLS_grlsYTFYREXX Golden Retriever 24.37
  5. GRLS_grlsCSQMX133 Golden Retriever 24.64
GRLS_grls3U9JKEMM's breed

GRLS_grls3U9JKEMM sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 78%
  2. Labrador Retriever 22%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.648
y 10.852
z 5.172
PCA-256 distance from breed centroid
44.04
Outlier percentile in breed
89
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grls3U9JKEMM scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC13 z = -4.76
  • chr11:38,528,765 loading 0.0255
  • chr18:48,123,615 loading 0.0255
  • chr15:30,849,502 loading 0.0253
PC19 z = 2.57
  • chr36:5,342,283 loading 0.0327
  • chr3:69,391,244 loading 0.0300
  • chr25:17,826,837 loading -0.0278
PC179 z = -2.47
  • chr34:3,531,310 loading 0.0341
  • chr34:3,128,578 loading -0.0327
  • chr4:57,360,298 loading -0.0326
Ancestry reconstruction error: 0.71
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