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Cosmic medallion portrait of GRLS_grls46LWI3KK, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grls46LWI3KK

GRLS_grls46LWI3KK is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grls46LWI3KK in the atlas
About GRLS_grls46LWI3KK

GRLS_grls46LWI3KK sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
GRLS_grls46LWI3KK's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grls46LWI3KK's. Click any of them to keep exploring.

  1. GRLS_grlsL428H277 Golden Retriever 27.56
  2. GRLS_grls6YVS6OCC Golden Retriever 30.25
  3. GRLS_grls1GO7OVJJ Golden Retriever 32.40
  4. GRLS_grlsNKMG0U88 Golden Retriever 33.77
  5. PILOT_grls8TUR3477 Golden Retriever 34.07
GRLS_grls46LWI3KK's breed

GRLS_grls46LWI3KK sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 77%
  2. Labrador Retriever 23%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.339
y 9.639
z 8.857
PCA-256 distance from breed centroid
35.94
Outlier percentile in breed
58
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grls46LWI3KK scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC104 z = 3.51
  • chr22:50,496,950 loading 0.0372
  • chr22:50,557,284 loading 0.0371
  • chr22:50,255,163 loading 0.0370
PC191 z = 3.35
  • chr19:11,721,356 loading 0.0330
  • chr20:8,205,745 loading 0.0329
  • chr25:2,138,835 loading -0.0328
PC177 z = -2.96
  • chr12:606,598 loading 0.0433
  • chr12:4,288,226 loading -0.0385
  • chr12:1,150,085 loading 0.0383
Ancestry reconstruction error: 0.58
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