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Cosmic medallion portrait of GRLS_grls4B6MVFSS, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grls4B6MVFSS

GRLS_grls4B6MVFSS is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grls4B6MVFSS in the atlas
About GRLS_grls4B6MVFSS

GRLS_grls4B6MVFSS is a notable Golden Retriever - distinctive within the breed.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
GRLS_grls4B6MVFSS's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grls4B6MVFSS's. Click any of them to keep exploring.

  1. GRLS_grlsNOO8MWLL Golden Retriever 31.83
  2. GRLS_grlsM6DVEOJJ Golden Retriever 34.07
  3. GRLS_grls0TA2I2SS Golden Retriever 36.13
  4. PILOT_grlsPQQI36SS Golden Retriever 37.71
  5. GRLS_grlsLLH2XVSS Golden Retriever 38.40
GRLS_grls4B6MVFSS's breed

GRLS_grls4B6MVFSS sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 78%
  2. Labrador Retriever 22%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.776
y 10.342
z 9.475
PCA-256 distance from breed centroid
39.74
Outlier percentile in breed
75
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grls4B6MVFSS scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC97 z = -3.49
  • chr15:42,263,341 loading 0.0348
  • chr18:11,175,691 loading -0.0320
  • chr1:63,849,832 loading 0.0318
PC190 z = 3.23
  • chr30:3,320,848 loading 0.0326
  • chr30:3,423,077 loading 0.0326
  • chr30:3,200,238 loading 0.0321
PC112 z = -2.84
  • chr3:6,565,383 loading 0.0418
  • chr18:10,714,022 loading 0.0387
  • chr3:6,720,531 loading 0.0365
Ancestry reconstruction error: 0.62
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