Skip to main content
snıff
GRLS Hero · Founder
Cosmic medallion portrait of GRLS_grls5TDRJOZZ, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grls5TDRJOZZ

GRLS_grls5TDRJOZZ is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grls5TDRJOZZ in the atlas
About GRLS_grls5TDRJOZZ

GRLS_grls5TDRJOZZ sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
GRLS_grls5TDRJOZZ's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grls5TDRJOZZ's. Click any of them to keep exploring.

  1. GRLS_grlsK84M6ENN Golden Retriever 28.68
  2. GRLS_grls0ITPHYFF Golden Retriever 29.34
  3. PILOT_grls6G37VK44 Golden Retriever 33.51
  4. PFZ44B10_PFZ44B10 Golden Retriever 33.91
  5. Oldies_grlsad82acc7 Golden Retriever 34.89
GRLS_grls5TDRJOZZ's breed

GRLS_grls5TDRJOZZ sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 78%
  2. Labrador Retriever 22%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.411
y 9.649
z 8.489
PCA-256 distance from breed centroid
39.60
Outlier percentile in breed
75
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grls5TDRJOZZ scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC87 z = 3.41
  • chr18:17,740,291 loading 0.0425
  • chr18:13,022,424 loading -0.0364
  • chr18:14,917,450 loading -0.0361
PC13 z = 2.64
  • chr11:38,528,765 loading 0.0255
  • chr18:48,123,615 loading 0.0255
  • chr15:30,849,502 loading 0.0253
PC204 z = 2.51
  • chr5:63,349,947 loading 0.0351
  • chr5:63,561,040 loading 0.0350
  • chr5:3,335,614 loading -0.0334
Ancestry reconstruction error: 0.61
Back to the Atlas →