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Cosmic medallion portrait of GRLS_grls5UBCFJUU, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grls5UBCFJUU

GRLS_grls5UBCFJUU is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grls5UBCFJUU in the atlas
About GRLS_grls5UBCFJUU

GRLS_grls5UBCFJUU is a notable Golden Retriever - distinctive within the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
GRLS_grls5UBCFJUU's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grls5UBCFJUU's. Click any of them to keep exploring.

  1. GRLS_grlsQQNDWNXX Golden Retriever 35.27
  2. GRLS_grls7W3BTUSS Golden Retriever 36.01
  3. GRLS_grlsSI5C80NN Golden Retriever 36.05
  4. GRLS_grlsZH05J9RR Golden Retriever 36.06
  5. GRLS_grls85B5C844 Golden Retriever 36.19
GRLS_grls5UBCFJUU's breed

GRLS_grls5UBCFJUU sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 79%
  2. Labrador Retriever 21%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.418
y 10.262
z 8.538
PCA-256 distance from breed centroid
40.75
Outlier percentile in breed
79
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grls5UBCFJUU scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC101 z = -3.82
  • chr1:74,476,966 loading 0.0401
  • chr1:74,547,137 loading -0.0372
  • chr1:74,609,719 loading 0.0354
PC221 z = -2.95
  • chr23:23,759,985 loading 0.0312
  • chr2:32,595,915 loading 0.0312
  • chr3:6,457,748 loading -0.0306
PC125 z = 2.92
  • chr26:7,428,484 loading 0.0355
  • chr21:3,789,149 loading 0.0351
  • chr4:1,268,630 loading 0.0319
Ancestry reconstruction error: 0.65
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