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Cosmic medallion portrait of GRLS_grls7K6Z7LXX, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grls7K6Z7LXX

GRLS_grls7K6Z7LXX is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grls7K6Z7LXX in the atlas
About GRLS_grls7K6Z7LXX

GRLS_grls7K6Z7LXX sits near the center of the Golden Retriever cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
GRLS_grls7K6Z7LXX's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grls7K6Z7LXX's. Click any of them to keep exploring.

  1. GRLS_grlsNJN1N711 Golden Retriever 29.63
  2. PILOT_grlsHRUPI9FF Golden Retriever 30.95
  3. GRLS_grlsMGE5UI55 Golden Retriever 31.10
  4. GRLS_grlsJ6EIUS00 Golden Retriever 31.39
  5. Oldies_grls19c93b34 Golden Retriever 31.53
GRLS_grls7K6Z7LXX's breed

GRLS_grls7K6Z7LXX sits firmly in the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.222
y 10.417
z 8.443
PCA-256 distance from breed centroid
25.82
Outlier percentile in breed
4
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grls7K6Z7LXX scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC209 z = -2.50
  • chr7:5,846,709 loading 0.0374
  • chr7:2,256,768 loading -0.0351
  • chr25:8,169,704 loading 0.0337
PC162 z = 2.45
  • chr6:16,267,511 loading 0.0413
  • chr6:16,208,125 loading 0.0394
  • chr6:17,304,623 loading -0.0387
PC140 z = -2.36
  • chr19:4,037,398 loading 0.0415
  • chr19:5,321,387 loading 0.0400
  • chr19:5,388,895 loading -0.0395
Ancestry reconstruction error: 0.47
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