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Cosmic medallion portrait of GRLS_grlsMGE5UI55, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsMGE5UI55

GRLS_grlsMGE5UI55 is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsMGE5UI55 in the atlas
About GRLS_grlsMGE5UI55

GRLS_grlsMGE5UI55 sits near the center of the Golden Retriever cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Carrier of the RSPO2 wire-coat variant (single copy).
GRLS_grlsMGE5UI55's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsMGE5UI55's. Click any of them to keep exploring.

  1. GRLS_grls7K6Z7LXX Golden Retriever 31.10
  2. GRLS_grlsUA684755 Golden Retriever 31.67
  3. GRLS_grlsBUQ26I00 Golden Retriever 31.68
  4. Oldies_grls19c93b34 Golden Retriever 31.83
  5. GRLS_grls1XUEQXNN Golden Retriever 31.83
GRLS_grlsMGE5UI55's breed

GRLS_grlsMGE5UI55 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 84%
  2. Labrador Retriever 16%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 C/C
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/C
Coat
RSPO2 C/T
FGF5 T/T
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.285
y 10.042
z 8.299
PCA-256 distance from breed centroid
26.53
Outlier percentile in breed
7
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsMGE5UI55 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC206 z = 2.90
  • chr7:42,935,741 loading 0.0386
  • chr19:34,609,563 loading -0.0356
  • chr30:22,656,587 loading 0.0321
PC217 z = -2.49
  • chr3:37,847,773 loading 0.0404
  • chr3:37,885,813 loading 0.0400
  • chr3:38,305,313 loading 0.0391
PC223 z = 2.24
  • chr7:43,046,169 loading 0.0391
  • chr13:1,840,654 loading 0.0338
  • chr22:3,486,881 loading -0.0327
Ancestry reconstruction error: 0.50
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