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Cosmic medallion portrait of GRLS_grls9ZZR7ZGG, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grls9ZZR7ZGG

GRLS_grls9ZZR7ZGG is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grls9ZZR7ZGG in the atlas
About GRLS_grls9ZZR7ZGG

GRLS_grls9ZZR7ZGG sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
GRLS_grls9ZZR7ZGG's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grls9ZZR7ZGG's. Click any of them to keep exploring.

  1. GRLS_grlsKWNYE7JJ Golden Retriever 26.87
  2. GRLS_grlsYH2JVNN Golden Retriever 28.55
  3. GRLS_grls17BSWSYY Golden Retriever 32.65
  4. GRLS_grlsYC4IWSHH Golden Retriever 33.54
  5. GRLS_grlsNJEU1XDD Golden Retriever 34.17
GRLS_grls9ZZR7ZGG's breed

GRLS_grls9ZZR7ZGG sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 81%
  2. Labrador Retriever 19%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.643
y 10.285
z 9.275
PCA-256 distance from breed centroid
39.15
Outlier percentile in breed
73
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grls9ZZR7ZGG scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC53 z = -3.39
  • chr1:72,254,803 loading 0.0346
  • chr1:70,825,780 loading 0.0344
  • chr14:9,177,180 loading 0.0335
PC49 z = 3.21
  • chr22:1,808,281 loading 0.0358
  • chr1:70,511,608 loading 0.0354
  • chr22:2,157,682 loading 0.0341
PC233 z = -2.82
  • chr16:48,608,303 loading 0.0348
  • chr13:24,655,299 loading -0.0330
  • chr23:1,734,032 loading 0.0330
Ancestry reconstruction error: 0.59
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