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Cosmic medallion portrait of GRLS_grlsAV8T0BGG, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsAV8T0BGG

GRLS_grlsAV8T0BGG is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsAV8T0BGG in the atlas
About GRLS_grlsAV8T0BGG

GRLS_grlsAV8T0BGG sits well inside the Golden Retriever cluster - a fairly typical example.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
GRLS_grlsAV8T0BGG's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsAV8T0BGG's. Click any of them to keep exploring.

  1. GRLS_grls81EERCKK Golden Retriever 26.47
  2. GRLS_grlsWPC63PJJ Golden Retriever 27.90
  3. GRLS_grls3726GINN Golden Retriever 28.03
  4. GRLS_grlsK604SFEE Golden Retriever 28.12
  5. PFZ42H06_PFZ42H06 Golden Retriever 28.20
GRLS_grlsAV8T0BGG's breed

GRLS_grlsAV8T0BGG sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 77%
  2. Labrador Retriever 23%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.020
y 11.665
z 8.068
PCA-256 distance from breed centroid
30.84
Outlier percentile in breed
31
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsAV8T0BGG scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC43 z = -3.11
  • chr28:11,007,373 loading 0.0365
  • chr28:5,497,677 loading 0.0343
  • chr7:43,226,466 loading 0.0325
PC225 z = 2.61
  • chr23:37,382,588 loading 0.0307
  • chr7:21,991,064 loading -0.0305
  • chr6:50,176,215 loading 0.0304
PC250 z = 2.48
  • chr9:17,840,166 loading 0.0300
  • chr9:50,441,577 loading 0.0297
  • chr15:28,843,971 loading -0.0296
Ancestry reconstruction error: 0.62
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