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Cosmic medallion portrait of GRLS_grlsAWQG9LMM, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsAWQG9LMM

GRLS_grlsAWQG9LMM is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsAWQG9LMM in the atlas
About GRLS_grlsAWQG9LMM

GRLS_grlsAWQG9LMM sits near the center of the Golden Retriever cluster - genetically very typical for the breed.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Smooth coat. No wire-furnishings variant at RSPO2.
GRLS_grlsAWQG9LMM's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsAWQG9LMM's. Click any of them to keep exploring.

  1. GRLS_grlsRSFVQY99 Golden Retriever 27.96
  2. GRLS_grls1XUEQXNN Golden Retriever 28.57
  3. PFZ4B02_PFZ4B02 Golden Retriever 29.40
  4. GRLS_grlsYCV6JRR Golden Retriever 30.81
  5. GRLS_grlsNWQLV911 Golden Retriever 31.41
GRLS_grlsAWQG9LMM's breed

GRLS_grlsAWQG9LMM sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 83%
  2. Labrador Retriever 18%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.463
y 10.374
z 8.591
PCA-256 distance from breed centroid
25.64
Outlier percentile in breed
3
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsAWQG9LMM scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC173 z = 2.73
  • chr17:4,173,842 loading 0.0406
  • chr17:4,233,511 loading 0.0400
  • chr17:4,353,120 loading 0.0343
PC237 z = 2.02
  • chr18:10,316,807 loading 0.0412
  • chr18:49,993,975 loading -0.0328
  • chr4:32,494,543 loading 0.0323
PC103 z = -2.00
  • chr1:73,451,600 loading 0.0356
  • chr1:69,785,342 loading 0.0343
  • chr18:18,333,364 loading 0.0329
Ancestry reconstruction error: 0.47
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