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Cosmic medallion portrait of GRLS_grlsD3O0F7NN, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsD3O0F7NN

GRLS_grlsD3O0F7NN is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsD3O0F7NN in the atlas
About GRLS_grlsD3O0F7NN

GRLS_grlsD3O0F7NN sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
GRLS_grlsD3O0F7NN's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsD3O0F7NN's. Click any of them to keep exploring.

  1. GRLS_grlsME1IJFZZ Golden Retriever 30.71
  2. GRLS_grls7ZH3Y8BB Golden Retriever 34.34
  3. GRLS_grlsML4B00QQ Golden Retriever 34.67
  4. GRLS_grls0O6N06KK Golden Retriever 35.65
  5. GRLS_grls9DKH3N88 Golden Retriever 36.12
GRLS_grlsD3O0F7NN's breed

GRLS_grlsD3O0F7NN sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 74%
  2. Labrador Retriever 26%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.964
y 9.415
z 8.800
PCA-256 distance from breed centroid
35.83
Outlier percentile in breed
57
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsD3O0F7NN scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC202 z = -4.37
  • chr7:2,141,056 loading 0.0366
  • chr14:36,686,192 loading -0.0363
  • chr14:12,756,008 loading -0.0320
PC77 z = -3.24
  • chr23:13,507,176 loading 0.0356
  • chr6:36,116,228 loading 0.0355
  • chr23:14,586,660 loading 0.0337
PC148 z = -3.09
  • chr6:30,769,727 loading 0.0436
  • chr1:62,992,483 loading -0.0356
  • chr6:30,876,588 loading -0.0355
Ancestry reconstruction error: 0.60
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