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Cosmic medallion portrait of GRLS_grlsED6P5KYY, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsED6P5KYY

GRLS_grlsED6P5KYY is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsED6P5KYY in the atlas
About GRLS_grlsED6P5KYY

GRLS_grlsED6P5KYY sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
GRLS_grlsED6P5KYY's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsED6P5KYY's. Click any of them to keep exploring.

  1. GRLS_grls4QUZPM44 Golden Retriever 26.38
  2. GRLS_grlsJT30XRUU Golden Retriever 29.62
  3. GRLS_grlsH5J26WOO Golden Retriever 33.06
  4. GRLS_grlsPJVPX6LL Golden Retriever 35.46
  5. GRLS_grls71IO1144 Golden Retriever 35.86
GRLS_grlsED6P5KYY's breed

GRLS_grlsED6P5KYY sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 82%
  2. Labrador Retriever 18%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.430
y 9.545
z 8.562
PCA-256 distance from breed centroid
38.05
Outlier percentile in breed
68
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsED6P5KYY scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC229 z = -3.22
  • chr1:6,763,543 loading 0.0357
  • chr22:9,968,688 loading -0.0319
  • chr5:58,349,244 loading -0.0314
PC160 z = 2.74
  • chr26:4,196,092 loading 0.0325
  • chr1:1,402,180 loading -0.0321
  • chr17:2,046,668 loading -0.0309
PC98 z = 2.64
  • chr1:70,040,058 loading 0.0369
  • chr1:99,414,793 loading -0.0351
  • chr24:7,157,643 loading 0.0343
Ancestry reconstruction error: 0.59
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