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Cosmic medallion portrait of GRLS_grlsEUP75WW, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsEUP75WW

GRLS_grlsEUP75WW is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsEUP75WW in the atlas
About GRLS_grlsEUP75WW

GRLS_grlsEUP75WW is a notable Golden Retriever - distinctive within the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
GRLS_grlsEUP75WW's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsEUP75WW's. Click any of them to keep exploring.

  1. GRLS_grls3PFMT388 Golden Retriever 25.59
  2. GRLS_grlsO131099 Golden Retriever 25.64
  3. GRLS_grls3KMKIQ11 Golden Retriever 25.81
  4. GRLS_grlsWHAB5BGG Golden Retriever 26.20
  5. GRLS_grlsU6VUAM00 Golden Retriever 26.27
GRLS_grlsEUP75WW's breed

GRLS_grlsEUP75WW sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 82%
  2. Labrador Retriever 18%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/T
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.610
y 10.819
z 5.125
PCA-256 distance from breed centroid
44.51
Outlier percentile in breed
90
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsEUP75WW scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC13 z = -4.46
  • chr11:38,528,765 loading 0.0255
  • chr18:48,123,615 loading 0.0255
  • chr15:30,849,502 loading 0.0253
PC19 z = 2.45
  • chr36:5,342,283 loading 0.0327
  • chr3:69,391,244 loading 0.0300
  • chr25:17,826,837 loading -0.0278
PC148 z = -2.40
  • chr6:30,769,727 loading 0.0436
  • chr1:62,992,483 loading -0.0356
  • chr6:30,876,588 loading -0.0355
Ancestry reconstruction error: 0.70
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