Skip to main content
snıff
GRLS Hero · Founder
Cosmic medallion portrait of GRLS_grlsFO5R9P88, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsFO5R9P88

GRLS_grlsFO5R9P88 is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsFO5R9P88 in the atlas
About GRLS_grlsFO5R9P88

GRLS_grlsFO5R9P88 sits well inside the Golden Retriever cluster - a fairly typical example.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
GRLS_grlsFO5R9P88's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsFO5R9P88's. Click any of them to keep exploring.

  1. GRLS_grlsBUJQ1711 Golden Retriever 21.65
  2. GRLS_grlsH2QK8KK Golden Retriever 30.74
  3. GRLS_grlsB4GNNEMM Golden Retriever 33.19
  4. GRLS_grls40UEVBZZ Golden Retriever 34.40
  5. GRLS_grls3TP3YZQQ Golden Retriever 34.42
GRLS_grlsFO5R9P88's breed

GRLS_grlsFO5R9P88 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 79%
  2. Labrador Retriever 21%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/T
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.581
y 10.654
z 7.727
PCA-256 distance from breed centroid
31.17
Outlier percentile in breed
33
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsFO5R9P88 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC208 z = -3.03
  • chr17:4,173,842 loading 0.0377
  • chr17:4,128,965 loading 0.0376
  • chr17:4,233,511 loading 0.0366
PC181 z = -2.89
  • chr19:2,539,757 loading 0.0344
  • chr3:6,392,552 loading -0.0326
  • chr6:16,157,160 loading 0.0301
PC174 z = -2.58
  • chr19:6,752,118 loading 0.0369
  • chr24:5,019,735 loading -0.0328
  • chr4:69,338,731 loading -0.0309
Ancestry reconstruction error: 0.54
Back to the Atlas →