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Cosmic medallion portrait of GRLS_grlsH63CO8TT, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsH63CO8TT

GRLS_grlsH63CO8TT is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsH63CO8TT in the atlas
About GRLS_grlsH63CO8TT

GRLS_grlsH63CO8TT sits near the center of the Golden Retriever cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
GRLS_grlsH63CO8TT's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsH63CO8TT's. Click any of them to keep exploring.

  1. GRLS_grlsX73QS1QQ Golden Retriever 26.40
  2. GRLS_grls494T1OXX Golden Retriever 26.87
  3. GRLS_grlsVBMXEPP Golden Retriever 27.14
  4. PFZ27A01_PFZ27A01 Golden Retriever 27.39
  5. GRLS_grlsRLC7RDEE Golden Retriever 27.54
GRLS_grlsH63CO8TT's breed

GRLS_grlsH63CO8TT sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 78%
  2. Labrador Retriever 22%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.204
y 11.139
z 8.044
PCA-256 distance from breed centroid
26.34
Outlier percentile in breed
6
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsH63CO8TT scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC43 z = -2.39
  • chr28:11,007,373 loading 0.0365
  • chr28:5,497,677 loading 0.0343
  • chr7:43,226,466 loading 0.0325
PC130 z = -2.03
  • chr6:33,386,202 loading 0.0387
  • chr6:30,876,588 loading 0.0376
  • chr6:30,769,727 loading -0.0372
PC220 z = 2.01
  • chr23:1,615,600 loading 0.0324
  • chr16:44,022,534 loading 0.0322
  • chr20:3,540,281 loading -0.0307
Ancestry reconstruction error: 0.53
Back to the Atlas →