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Cosmic medallion portrait of GRLS_grlsH8UP2NNN, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsH8UP2NNN

GRLS_grlsH8UP2NNN is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsH8UP2NNN in the atlas
About GRLS_grlsH8UP2NNN

GRLS_grlsH8UP2NNN sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
GRLS_grlsH8UP2NNN's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsH8UP2NNN's. Click any of them to keep exploring.

  1. GRLS_grls7A730Z22 Golden Retriever 21.32
  2. GRLS_grlsLMEV166 Golden Retriever 21.53
  3. GRLS_grls4QMUYS99 Golden Retriever 25.54
  4. GRLS_grlsE9MPH2YY Golden Retriever 29.73
  5. GRLS_grls0G7VYQ55 Golden Retriever 33.31
GRLS_grlsH8UP2NNN's breed

GRLS_grlsH8UP2NNN sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 81%
  2. Labrador Retriever 19%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.575
y 10.456
z 9.066
PCA-256 distance from breed centroid
37.68
Outlier percentile in breed
66
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsH8UP2NNN scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC126 z = -3.78
  • chr21:31,645,739 loading 0.0387
  • chr21:34,014,573 loading -0.0385
  • chr26:6,573,837 loading 0.0382
PC197 z = -3.50
  • chr7:40,629,884 loading 0.0367
  • chr7:40,535,333 loading 0.0324
  • chr18:50,696,547 loading 0.0323
PC186 z = 3.34
  • chr3:6,234,729 loading 0.0318
  • chr23:19,305,339 loading 0.0317
  • chr19:17,376,904 loading 0.0316
Ancestry reconstruction error: 0.60
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