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Cosmic medallion portrait of GRLS_grlsHR6YHDHH, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsHR6YHDHH

GRLS_grlsHR6YHDHH is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsHR6YHDHH in the atlas
About GRLS_grlsHR6YHDHH

GRLS_grlsHR6YHDHH sits near the center of the Golden Retriever cluster - genetically very typical for the breed.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
GRLS_grlsHR6YHDHH's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsHR6YHDHH's. Click any of them to keep exploring.

  1. PILOT_grlsRSZJDOMM Golden Retriever 22.76
  2. Oldies_grlsd989ac83 Golden Retriever 31.15
  3. GRLS_grlsPHP5TVTT Golden Retriever 31.36
  4. GRLS_grls59085811 Golden Retriever 31.59
  5. GRLS_grlsK1QOHAQQ Golden Retriever 31.67
GRLS_grlsHR6YHDHH's breed

GRLS_grlsHR6YHDHH sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 76%
  2. Labrador Retriever 24%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.676
y 10.831
z 8.145
PCA-256 distance from breed centroid
26.54
Outlier percentile in breed
7
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsHR6YHDHH scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC236 z = 2.86
  • chr20:38,047,521 loading 0.0380
  • chr20:38,715,188 loading -0.0374
  • chr20:38,805,558 loading -0.0370
PC151 z = -2.47
  • chr8:31,106,810 loading 0.0325
  • chr8:5,470,795 loading -0.0318
  • chr19:36,545,009 loading -0.0310
PC214 z = 2.26
  • chr22:26,809,841 loading 0.0329
  • chr13:7,517,248 loading -0.0323
  • chr26:11,829,785 loading 0.0322
Ancestry reconstruction error: 0.51
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