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Cosmic medallion portrait of GRLS_grlsI7T0B888, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsI7T0B888

GRLS_grlsI7T0B888 is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsI7T0B888 in the atlas
About GRLS_grlsI7T0B888

GRLS_grlsI7T0B888 is a notable Golden Retriever - distinctive within the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
GRLS_grlsI7T0B888's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsI7T0B888's. Click any of them to keep exploring.

  1. GRLS_grls4ECKYCTT Golden Retriever 26.10
  2. GRLS_grls9C1O7DRR Golden Retriever 26.30
  3. GRLS_grlsXMDSVDHH Golden Retriever 26.35
  4. GR_26798_GR_26798 Golden Retriever 26.77
  5. GR_32558_GR_32558 Golden Retriever 26.89
GRLS_grlsI7T0B888's breed

GRLS_grlsI7T0B888 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 79%
  2. Labrador Retriever 21%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.693
y 10.690
z 5.372
PCA-256 distance from breed centroid
40.40
Outlier percentile in breed
78
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsI7T0B888 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC13 z = -4.14
  • chr11:38,528,765 loading 0.0255
  • chr18:48,123,615 loading 0.0255
  • chr15:30,849,502 loading 0.0253
PC197 z = 2.83
  • chr7:40,629,884 loading 0.0367
  • chr7:40,535,333 loading 0.0324
  • chr18:50,696,547 loading 0.0323
PC210 z = -2.16
  • chr14:14,236,787 loading 0.0332
  • chr19:34,609,563 loading -0.0320
  • chr24:23,645,624 loading 0.0312
Ancestry reconstruction error: 0.70
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