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Cosmic medallion portrait of GRLS_grlsIB8ZCI66, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsIB8ZCI66

GRLS_grlsIB8ZCI66 is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsIB8ZCI66 in the atlas
About GRLS_grlsIB8ZCI66

GRLS_grlsIB8ZCI66 sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
GRLS_grlsIB8ZCI66's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsIB8ZCI66's. Click any of them to keep exploring.

  1. GRLS_grls6WJ809MM Golden Retriever 36.72
  2. GRLS_grlsN4RK7ERR Golden Retriever 36.93
  3. PILOT_grlsN9LGP8BB Golden Retriever 37.22
  4. GRLS_grlsSYFLK1II Golden Retriever 37.75
  5. GRLS_grls75T7OLL Golden Retriever 37.78
GRLS_grlsIB8ZCI66's breed

GRLS_grlsIB8ZCI66 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 81%
  2. Labrador Retriever 20%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.587
y 10.271
z 8.986
PCA-256 distance from breed centroid
37.12
Outlier percentile in breed
64
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsIB8ZCI66 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC159 z = 3.92
  • chr1:17,158,018 loading 0.0357
  • chr5:59,845,529 loading 0.0334
  • chr11:16,824,143 loading -0.0291
PC235 z = 3.32
  • chr5:7,618,997 loading 0.0371
  • chr18:10,714,022 loading 0.0318
  • chr25:27,400,046 loading 0.0312
PC141 z = 3.00
  • chr1:100,458,946 loading 0.0347
  • chr13:7,517,248 loading 0.0343
  • chr25:7,661,243 loading -0.0339
Ancestry reconstruction error: 0.62
Back to the Atlas →