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Cosmic medallion portrait of GRLS_grlsIY49NKWW, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsIY49NKWW

GRLS_grlsIY49NKWW is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsIY49NKWW in the atlas
About GRLS_grlsIY49NKWW

GRLS_grlsIY49NKWW sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
GRLS_grlsIY49NKWW's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsIY49NKWW's. Click any of them to keep exploring.

  1. GRLS_grlsHL41BAJJ Golden Retriever 31.90
  2. GRLS_grlsJUMJ2Z33 Golden Retriever 33.04
  3. GRLS_grlsW1UT6NN Golden Retriever 33.44
  4. GRLS_grlsP6EBH2FF Golden Retriever 33.45
  5. GRLS_grlsRP2416JJ Golden Retriever 33.53
GRLS_grlsIY49NKWW's breed

GRLS_grlsIY49NKWW sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 80%
  2. Labrador Retriever 20%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 T/T
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.378
y 9.355
z 7.652
PCA-256 distance from breed centroid
38.51
Outlier percentile in breed
70
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsIY49NKWW scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC77 z = 4.26
  • chr23:13,507,176 loading 0.0356
  • chr6:36,116,228 loading 0.0355
  • chr23:14,586,660 loading 0.0337
PC176 z = 3.67
  • chr13:1,243,516 loading 0.0372
  • chr13:4,612,002 loading -0.0358
  • chr13:2,021,999 loading -0.0342
PC130 z = -3.53
  • chr6:33,386,202 loading 0.0387
  • chr6:30,876,588 loading 0.0376
  • chr6:30,769,727 loading -0.0372
Ancestry reconstruction error: 0.61
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