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Cosmic medallion portrait of GRLS_grlsKU5NXIQQ, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsKU5NXIQQ

GRLS_grlsKU5NXIQQ is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsKU5NXIQQ in the atlas
About GRLS_grlsKU5NXIQQ

GRLS_grlsKU5NXIQQ sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
GRLS_grlsKU5NXIQQ's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsKU5NXIQQ's. Click any of them to keep exploring.

  1. GRLS_grlsLJ2VI277 Golden Retriever 20.87
  2. GRLS_grlsNKMG0U88 Golden Retriever 27.40
  3. GRLS_grlsZ5EFYFLL Golden Retriever 28.30
  4. GRLS_grlsJO1ADY55 Golden Retriever 30.72
  5. PILOT_grls8TUR3477 Golden Retriever 33.99
GRLS_grlsKU5NXIQQ's breed

GRLS_grlsKU5NXIQQ sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 80%
  2. Labrador Retriever 20%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.520
y 9.597
z 8.615
PCA-256 distance from breed centroid
38.43
Outlier percentile in breed
70
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsKU5NXIQQ scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC121 z = 4.18
  • chr1:99,506,167 loading 0.0408
  • chr15:22,270,589 loading -0.0399
  • chr15:22,844,988 loading -0.0387
PC211 z = -4.15
  • chr18:2,884,545 loading 0.0378
  • chr18:2,790,632 loading -0.0346
  • chr19:17,007,564 loading -0.0346
PC194 z = 2.87
  • chr25:31,475,309 loading 0.0351
  • chr3:6,392,552 loading 0.0298
  • chr25:27,400,046 loading 0.0293
Ancestry reconstruction error: 0.60
Back to the Atlas →