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Cosmic medallion portrait of GRLS_grlsM1IE4PUU, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsM1IE4PUU

GRLS_grlsM1IE4PUU is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsM1IE4PUU in the atlas
About GRLS_grlsM1IE4PUU

GRLS_grlsM1IE4PUU sits near the center of the Golden Retriever cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
GRLS_grlsM1IE4PUU's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsM1IE4PUU's. Click any of them to keep exploring.

  1. GRLS_grls2PGPY0RR Golden Retriever 28.57
  2. GRLS_grlsKTJLCH99 Golden Retriever 28.80
  3. GRLS_grls40UEVBZZ Golden Retriever 28.91
  4. PFZ29A05_PFZ29A05 Golden Retriever 29.03
  5. GRLS_grlsAMLDQK88 Golden Retriever 29.12
GRLS_grlsM1IE4PUU's breed

GRLS_grlsM1IE4PUU sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 84%
  2. Labrador Retriever 17%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.801
y 10.887
z 7.677
PCA-256 distance from breed centroid
24.26
Outlier percentile in breed
1
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsM1IE4PUU scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC254 z = 1.89
  • chr6:33,386,202 loading 0.0315
  • chr26:12,107,781 loading 0.0293
  • chr1:50,654,367 loading 0.0289
PC163 z = 1.82
  • chr34:1,919,265 loading 0.0369
  • chr34:2,440,834 loading -0.0368
  • chr34:1,346,136 loading 0.0366
PC123 z = 1.72
  • chr1:96,988,408 loading 0.0363
  • chr34:2,125,452 loading -0.0340
  • chr9:14,046,505 loading -0.0338
Ancestry reconstruction error: 0.50
Back to the Atlas →