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Cosmic medallion portrait of GRLS_grlsOLFTEORR, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsOLFTEORR

GRLS_grlsOLFTEORR is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsOLFTEORR in the atlas
About GRLS_grlsOLFTEORR

GRLS_grlsOLFTEORR sits well inside the Golden Retriever cluster - a fairly typical example.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
GRLS_grlsOLFTEORR's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsOLFTEORR's. Click any of them to keep exploring.

  1. GRLS_grlsDBAQYDVV Golden Retriever 18.73
  2. GRLS_grlsVVUVDOPP Golden Retriever 29.51
  3. GRLS_grlsWGK4IN99 Golden Retriever 29.93
  4. PFZ27F05_PFZ27F05 Golden Retriever 30.11
  5. GRLS_grlsJ4UVD6FF Golden Retriever 30.61
GRLS_grlsOLFTEORR's breed

GRLS_grlsOLFTEORR sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 81%
  2. Labrador Retriever 19%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 C/C
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.119
y 11.457
z 8.067
PCA-256 distance from breed centroid
33.67
Outlier percentile in breed
45
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsOLFTEORR scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC43 z = -3.86
  • chr28:11,007,373 loading 0.0365
  • chr28:5,497,677 loading 0.0343
  • chr7:43,226,466 loading 0.0325
PC196 z = 2.79
  • chr23:3,426,742 loading 0.0355
  • chr23:3,756,166 loading 0.0335
  • chr4:38,305,840 loading 0.0333
PC174 z = 2.68
  • chr19:6,752,118 loading 0.0369
  • chr24:5,019,735 loading -0.0328
  • chr4:69,338,731 loading -0.0309
Ancestry reconstruction error: 0.63
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