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Cosmic medallion portrait of GRLS_grlsP90RNOJJ, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsP90RNOJJ

GRLS_grlsP90RNOJJ is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsP90RNOJJ in the atlas
About GRLS_grlsP90RNOJJ

GRLS_grlsP90RNOJJ sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
GRLS_grlsP90RNOJJ's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsP90RNOJJ's. Click any of them to keep exploring.

  1. GRLS_grlsDHC8DYY Golden Retriever 19.43
  2. GRLS_grlsG8CEWDGG Golden Retriever 19.60
  3. GRLS_grlsLMEPJC99 Golden Retriever 19.61
  4. GRLS_grls2QGPBUII Golden Retriever 20.44
  5. GRLS_grls4SP304TT Golden Retriever 33.71
GRLS_grlsP90RNOJJ's breed

GRLS_grlsP90RNOJJ sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 80%
  2. Labrador Retriever 20%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 5.497
y 10.182
z 7.586
PCA-256 distance from breed centroid
39.40
Outlier percentile in breed
74
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsP90RNOJJ scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC232 z = -3.28
  • chr8:13,394,852 loading 0.0320
  • chr30:2,998,314 loading 0.0313
  • chr12:26,709,882 loading 0.0290
PC126 z = -3.28
  • chr21:31,645,739 loading 0.0387
  • chr21:34,014,573 loading -0.0385
  • chr26:6,573,837 loading 0.0382
PC224 z = 3.19
  • chr1:60,626,811 loading 0.0345
  • chr1:60,550,367 loading 0.0321
  • chr7:17,102,947 loading 0.0300
Ancestry reconstruction error: 0.67
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