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Cosmic medallion portrait of GRLS_grlsQSRQX0ZZ, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsQSRQX0ZZ

GRLS_grlsQSRQX0ZZ is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsQSRQX0ZZ in the atlas
About GRLS_grlsQSRQX0ZZ

GRLS_grlsQSRQX0ZZ sits well inside the Golden Retriever cluster - a fairly typical example.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
GRLS_grlsQSRQX0ZZ's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsQSRQX0ZZ's. Click any of them to keep exploring.

  1. GRLS_grlsBSWQLPZZ Golden Retriever 28.86
  2. PFZ22F06_PFZ22F06 Golden Retriever 33.30
  3. PILOT_grls6G37VK44 Golden Retriever 34.12
  4. PILOT_grlsJ1UYSDSS Golden Retriever 34.13
  5. GRLS_grlsW9HGMLTT Golden Retriever 34.39
GRLS_grlsQSRQX0ZZ's breed

GRLS_grlsQSRQX0ZZ sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 77%
  2. Labrador Retriever 23%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.525
y 10.130
z 8.304
PCA-256 distance from breed centroid
31.46
Outlier percentile in breed
35
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsQSRQX0ZZ scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC254 z = 2.71
  • chr6:33,386,202 loading 0.0315
  • chr26:12,107,781 loading 0.0293
  • chr1:50,654,367 loading 0.0289
PC219 z = -2.68
  • chr11:18,600,601 loading 0.0312
  • chr14:14,201,384 loading 0.0302
  • chr3:6,077,116 loading -0.0298
PC197 z = -2.67
  • chr7:40,629,884 loading 0.0367
  • chr7:40,535,333 loading 0.0324
  • chr18:50,696,547 loading 0.0323
Ancestry reconstruction error: 0.54
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