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Cosmic medallion portrait of GRLS_grlsSWL86DJJ, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsSWL86DJJ

GRLS_grlsSWL86DJJ is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsSWL86DJJ in the atlas
About GRLS_grlsSWL86DJJ

GRLS_grlsSWL86DJJ is a notable Golden Retriever - distinctive within the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
GRLS_grlsSWL86DJJ's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsSWL86DJJ's. Click any of them to keep exploring.

  1. GRLS_grlsCQG3CGNN Golden Retriever 21.77
  2. GRLS_grlsVYWVEBUU Golden Retriever 24.63
  3. GRLS_grls4UW71QLL Golden Retriever 30.65
  4. GRLS_grlsEO82XEOO Golden Retriever 32.92
  5. GRLS_grls60B7GTOO Golden Retriever 36.89
GRLS_grlsSWL86DJJ's breed

GRLS_grlsSWL86DJJ sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 79%
  2. Labrador Retriever 21%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.232
y 9.582
z 8.721
PCA-256 distance from breed centroid
40.16
Outlier percentile in breed
77
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsSWL86DJJ scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC154 z = -5.45
  • chr34:1,972,619 loading 0.0431
  • chr34:1,533,247 loading 0.0397
  • chr34:2,125,452 loading 0.0365
PC208 z = -3.88
  • chr17:4,173,842 loading 0.0377
  • chr17:4,128,965 loading 0.0376
  • chr17:4,233,511 loading 0.0366
PC227 z = 3.61
  • chr27:43,803,988 loading 0.0373
  • chr12:19,514,576 loading 0.0344
  • chr20:11,758,428 loading -0.0328
Ancestry reconstruction error: 0.63
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