Skip to main content
snıff
GRLS Hero · Founder
Cosmic medallion portrait of GRLS_grlsTGJ10066, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsTGJ10066

GRLS_grlsTGJ10066 is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsTGJ10066 in the atlas
About GRLS_grlsTGJ10066

GRLS_grlsTGJ10066 sits well inside the Golden Retriever cluster - a fairly typical example.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
GRLS_grlsTGJ10066's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsTGJ10066's. Click any of them to keep exploring.

  1. GRLS_grlsDFAV444 Golden Retriever 31.15
  2. PFZ8H09_PFZ8H09 Golden Retriever 32.15
  3. GRLS_grlsW1UT6NN Golden Retriever 33.04
  4. GRLS_grlsE0PPYZOO Golden Retriever 33.15
  5. GRLS_grlsW0RLJN55 Golden Retriever 33.48
GRLS_grlsTGJ10066's breed

GRLS_grlsTGJ10066 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 77%
  2. Labrador Retriever 23%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 –
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.825
y 9.531
z 8.213
PCA-256 distance from breed centroid
30.16
Outlier percentile in breed
27
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsTGJ10066 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC227 z = 2.51
  • chr27:43,803,988 loading 0.0373
  • chr12:19,514,576 loading 0.0344
  • chr20:11,758,428 loading -0.0328
PC91 z = 2.48
  • chr10:1,924,717 loading 0.0382
  • chr10:1,676,762 loading 0.0377
  • chr30:3,709,721 loading 0.0366
PC135 z = -2.15
  • chr8:33,499,010 loading 0.0341
  • chr6:30,409,356 loading -0.0338
  • chr34:15,382,542 loading -0.0330
Ancestry reconstruction error: 0.52
Back to the Atlas →