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Cosmic medallion portrait of GRLS_grlsVN3MJIYY, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsVN3MJIYY

GRLS_grlsVN3MJIYY is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsVN3MJIYY in the atlas
About GRLS_grlsVN3MJIYY

GRLS_grlsVN3MJIYY sits near the center of the Golden Retriever cluster - genetically very typical for the breed.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
GRLS_grlsVN3MJIYY's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsVN3MJIYY's. Click any of them to keep exploring.

  1. PILOT_grlsTVVWBM66 Golden Retriever 28.18
  2. GRLS_grlsDGBTDGEE Golden Retriever 28.27
  3. PILOT_grlsYOGRGNWW Golden Retriever 28.42
  4. PILOT_grls43D0DWTT Golden Retriever 28.56
  5. GRLS_grlsWTUWRVLL Golden Retriever 28.69
GRLS_grlsVN3MJIYY's breed

GRLS_grlsVN3MJIYY sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 78%
  2. Labrador Retriever 22%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.834
y 11.007
z 7.983
PCA-256 distance from breed centroid
25.35
Outlier percentile in breed
2
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsVN3MJIYY scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC77 z = 2.67
  • chr23:13,507,176 loading 0.0356
  • chr6:36,116,228 loading 0.0355
  • chr23:14,586,660 loading 0.0337
PC248 z = 2.36
  • chr26:5,045,393 loading 0.0400
  • chr26:4,196,092 loading -0.0355
  • chr26:4,873,718 loading -0.0344
PC43 z = -2.35
  • chr28:11,007,373 loading 0.0365
  • chr28:5,497,677 loading 0.0343
  • chr7:43,226,466 loading 0.0325
Ancestry reconstruction error: 0.50
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