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Cosmic medallion portrait of GRLS_grlsWMVAOPII, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsWMVAOPII

GRLS_grlsWMVAOPII is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsWMVAOPII in the atlas
About GRLS_grlsWMVAOPII

GRLS_grlsWMVAOPII is a notable Golden Retriever - distinctive within the breed.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
GRLS_grlsWMVAOPII's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsWMVAOPII's. Click any of them to keep exploring.

  1. GRLS_grlsEO5YUP22 Golden Retriever 18.84
  2. GRLS_grlsAGL6KI22 Golden Retriever 28.04
  3. GRLS_grlsO5YUR99 Golden Retriever 29.64
  4. Oldies_grlsa4acae10 Golden Retriever 30.64
  5. GRLS_grlsOQ65UN Golden Retriever 30.81
GRLS_grlsWMVAOPII's breed

GRLS_grlsWMVAOPII sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 76%
  2. Labrador Retriever 24%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 5.614
y 10.616
z 7.216
PCA-256 distance from breed centroid
39.91
Outlier percentile in breed
76
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsWMVAOPII scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC19 z = -3.23
  • chr36:5,342,283 loading 0.0327
  • chr3:69,391,244 loading 0.0300
  • chr25:17,826,837 loading -0.0278
PC200 z = 2.93
  • chr26:9,892,015 loading 0.0403
  • chr19:3,081,516 loading 0.0393
  • chr26:3,675,581 loading 0.0362
PC112 z = 2.52
  • chr3:6,565,383 loading 0.0418
  • chr18:10,714,022 loading 0.0387
  • chr3:6,720,531 loading 0.0365
Ancestry reconstruction error: 0.69
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