Skip to main content
snıff
GRLS Hero · Founder
Cosmic medallion portrait of GRLS_grlsY2FM1GBB, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsY2FM1GBB

GRLS_grlsY2FM1GBB is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsY2FM1GBB in the atlas
About GRLS_grlsY2FM1GBB

GRLS_grlsY2FM1GBB sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
GRLS_grlsY2FM1GBB's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsY2FM1GBB's. Click any of them to keep exploring.

  1. GRLS_grlsVN8SZRSS Golden Retriever 23.78
  2. GRLS_grlsQ9FQU5SS Golden Retriever 29.73
  3. GRLS_grlsIO0AFTMM Golden Retriever 32.33
  4. GRLS_grlsPWQFUS00 Golden Retriever 33.52
  5. GRLS_grlsE4U1WZHH Golden Retriever 34.77
GRLS_grlsY2FM1GBB's breed

GRLS_grlsY2FM1GBB sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 81%
  2. Labrador Retriever 19%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.279
y 9.718
z 8.610
PCA-256 distance from breed centroid
37.15
Outlier percentile in breed
64
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsY2FM1GBB scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC105 z = -3.08
  • chr9:10,719,447 loading 0.0424
  • chr34:1,972,619 loading -0.0401
  • chr34:1,432,211 loading -0.0400
PC212 z = 2.98
  • chr28:326,614 loading 0.0378
  • chr2:50,919,591 loading 0.0372
  • chr28:1,791,942 loading -0.0335
PC232 z = -2.66
  • chr8:13,394,852 loading 0.0320
  • chr30:2,998,314 loading 0.0313
  • chr12:26,709,882 loading 0.0290
Ancestry reconstruction error: 0.59
Back to the Atlas →