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Cosmic medallion portrait of GRLS_grlsYFWBND88, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsYFWBND88

GRLS_grlsYFWBND88 is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsYFWBND88 in the atlas
About GRLS_grlsYFWBND88

GRLS_grlsYFWBND88 sits near the center of the Golden Retriever cluster - genetically very typical for the breed.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
GRLS_grlsYFWBND88's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsYFWBND88's. Click any of them to keep exploring.

  1. GRLS_grls4ZTLI2JJ Golden Retriever 29.64
  2. GRLS_grlsEI1W4ZQQ Golden Retriever 30.67
  3. GRLS_grls3T5R8MRR Golden Retriever 30.88
  4. GRLS_grlsHU8C0ENN Golden Retriever 31.30
  5. Oldies_grlsd989ac83 Golden Retriever 31.40
GRLS_grlsYFWBND88's breed

GRLS_grlsYFWBND88 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 78%
  2. Labrador Retriever 22%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.968
y 10.643
z 7.301
PCA-256 distance from breed centroid
26.33
Outlier percentile in breed
6
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsYFWBND88 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC204 z = -2.87
  • chr5:63,349,947 loading 0.0351
  • chr5:63,561,040 loading 0.0350
  • chr5:3,335,614 loading -0.0334
PC111 z = -2.52
  • chr25:27,400,046 loading 0.0340
  • chr8:38,891,669 loading -0.0320
  • chr6:31,045,365 loading -0.0319
PC197 z = -2.05
  • chr7:40,629,884 loading 0.0367
  • chr7:40,535,333 loading 0.0324
  • chr18:50,696,547 loading 0.0323
Ancestry reconstruction error: 0.50
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