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Cosmic medallion portrait of GRLS_grlsYLUNOS33, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsYLUNOS33

GRLS_grlsYLUNOS33 is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsYLUNOS33 in the atlas
About GRLS_grlsYLUNOS33

GRLS_grlsYLUNOS33 sits near the center of the Golden Retriever cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
GRLS_grlsYLUNOS33's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsYLUNOS33's. Click any of them to keep exploring.

  1. GRLS_grlsZ03WC1OO Golden Retriever 19.74
  2. GRLS_grlsQTZ8XMM Golden Retriever 27.50
  3. PILOT_grls7O56EF66 Golden Retriever 27.51
  4. GRLS_grlsGD3KTBVV Golden Retriever 27.57
  5. Oldies_grlsb817088e Golden Retriever 27.75
GRLS_grlsYLUNOS33's breed

GRLS_grlsYLUNOS33 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 81%
  2. Labrador Retriever 19%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 6.701
y 11.372
z 7.912
PCA-256 distance from breed centroid
28.74
Outlier percentile in breed
19
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsYLUNOS33 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC162 z = -2.56
  • chr6:16,267,511 loading 0.0413
  • chr6:16,208,125 loading 0.0394
  • chr6:17,304,623 loading -0.0387
PC241 z = 2.28
  • chr29:25,388,461 loading 0.0320
  • chr9:34,293,305 loading 0.0320
  • chr6:50,176,215 loading 0.0305
PC19 z = -2.12
  • chr36:5,342,283 loading 0.0327
  • chr3:69,391,244 loading 0.0300
  • chr25:17,826,837 loading -0.0278
Ancestry reconstruction error: 0.56
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