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GRLS Hero Oldie · Founder
Cosmic medallion portrait of Oldies_grlsa5430b91, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

Oldies_grlsa5430b91

Oldies_grlsa5430b91 is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See Oldies_grlsa5430b91 in the atlas
About Oldies_grlsa5430b91

Oldies_grlsa5430b91 sits near the center of the Golden Retriever cluster - genetically very typical for the breed.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
Oldies_grlsa5430b91's nearest neighbors

The five dogs in the atlas whose genomes sit closest to Oldies_grlsa5430b91's. Click any of them to keep exploring.

  1. Oldies_grls7c505b65 Golden Retriever 23.31
  2. GRLS_grlsO4I5K22 Golden Retriever 27.30
  3. GRLS_grlsQY72IOII Golden Retriever 30.69
  4. GRLS_grls47TW3NCC Golden Retriever 31.39
  5. GRLS_grlsM68CN7UU Golden Retriever 31.68
Oldies_grlsa5430b91's breed

Oldies_grlsa5430b91 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 79%
  2. Labrador Retriever 21%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 6.984
y 10.616
z 7.896
PCA-256 distance from breed centroid
28.94
Outlier percentile in breed
20
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which Oldies_grlsa5430b91 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC161 z = -3.45
  • chr25:6,699,887 loading 0.0385
  • chr8:38,372,734 loading -0.0369
  • chr15:23,258,994 loading -0.0343
PC187 z = 2.79
  • chr20:38,870,936 loading 0.0437
  • chr20:38,628,243 loading -0.0415
  • chr14:6,119,398 loading -0.0403
PC234 z = 2.78
  • chr4:83,381,939 loading 0.0343
  • chr10:64,946,466 loading 0.0322
  • chr30:24,029,755 loading -0.0321
Ancestry reconstruction error: 0.52
Back to the Atlas →