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GRLS Hero Oldie · Founder
Cosmic medallion portrait of Oldies_grlsae60821b, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

Oldies_grlsae60821b

Oldies_grlsae60821b is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See Oldies_grlsae60821b in the atlas
About Oldies_grlsae60821b

Oldies_grlsae60821b sits near the center of the Golden Retriever cluster - genetically very typical for the breed.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
Oldies_grlsae60821b's nearest neighbors

The five dogs in the atlas whose genomes sit closest to Oldies_grlsae60821b's. Click any of them to keep exploring.

  1. GRLS_grlsDRI8OU00 Golden Retriever 27.62
  2. GRLS_grlsDO2VF8ZZ Golden Retriever 27.75
  3. GRLS_grls9BIH3NYY Golden Retriever 28.88
  4. GRLS_grlsBMZY1XAA Golden Retriever 28.89
  5. PFZ26F02_PFZ26F02 Golden Retriever 28.97
Oldies_grlsae60821b's breed

Oldies_grlsae60821b sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 79%
  2. Labrador Retriever 21%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/C
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.283
y 11.281
z 8.220
PCA-256 distance from breed centroid
27.55
Outlier percentile in breed
12
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which Oldies_grlsae60821b scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC43 z = -2.60
  • chr28:11,007,373 loading 0.0365
  • chr28:5,497,677 loading 0.0343
  • chr7:43,226,466 loading 0.0325
PC249 z = 2.32
  • chr6:30,830,915 loading 0.0329
  • chr1:22,842,587 loading 0.0316
  • chr7:61,438,680 loading -0.0291
PC193 z = 2.31
  • chr19:1,162,032 loading 0.0555
  • chr19:1,420,658 loading 0.0489
  • chr19:1,685,081 loading -0.0433
Ancestry reconstruction error: 0.52
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