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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ23C02_PFZ23C02, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ23C02_PFZ23C02

PFZ23C02_PFZ23C02 is a Golden Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ23C02_PFZ23C02 in the atlas
About PFZ23C02_PFZ23C02

PFZ23C02_PFZ23C02 sits near the center of the Golden Retriever cluster - genetically very typical for the breed.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ23C02_PFZ23C02's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ23C02_PFZ23C02's. Click any of them to keep exploring.

  1. GRLS_grls4Q3HPJJJ Golden Retriever 26.86
  2. GRLS_grlsI7NM0MNN Golden Retriever 27.25
  3. GRLS_grlsNR40CYHH Golden Retriever 27.29
  4. GRLS_grlsXV2UUFYY Golden Retriever 27.38
  5. GRLS_grls81UM1522 Golden Retriever 27.52
PFZ23C02_PFZ23C02's breed

PFZ23C02_PFZ23C02 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 84%
  2. Labrador Retriever 16%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/C
Coat
RSPO2 C/T
FGF5 T/T
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.312
y 10.980
z 7.936
PCA-256 distance from breed centroid
25.79
Outlier percentile in breed
4
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ23C02_PFZ23C02 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC144 z = 2.40
  • chr17:4,173,842 loading 0.0340
  • chr34:2,125,452 loading 0.0333
  • chr17:4,128,965 loading 0.0327
PC43 z = -2.36
  • chr28:11,007,373 loading 0.0365
  • chr28:5,497,677 loading 0.0343
  • chr7:43,226,466 loading 0.0325
PC160 z = 2.04
  • chr26:4,196,092 loading 0.0325
  • chr1:1,402,180 loading -0.0321
  • chr17:2,046,668 loading -0.0309
Ancestry reconstruction error: 0.52
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