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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ26B08_PFZ26B08, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ26B08_PFZ26B08

PFZ26B08_PFZ26B08 is a Golden Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ26B08_PFZ26B08 in the atlas
About PFZ26B08_PFZ26B08

PFZ26B08_PFZ26B08 sits well inside the Golden Retriever cluster - a fairly typical example.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ26B08_PFZ26B08's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ26B08_PFZ26B08's. Click any of them to keep exploring.

  1. GRLS_grlsZS8EN0II Golden Retriever 34.81
  2. GRLS_grlsUJFR71NN Golden Retriever 35.33
  3. GRLS_grlsVBMXEPP Golden Retriever 35.87
  4. GRLS_grlsOMR9B833 Golden Retriever 35.98
  5. GRLS_grlsDGBTDGEE Golden Retriever 36.04
PFZ26B08_PFZ26B08's breed

PFZ26B08_PFZ26B08 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 79%
  2. Labrador Retriever 21%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.037
y 10.426
z 8.073
PCA-256 distance from breed centroid
33.13
Outlier percentile in breed
43
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ26B08_PFZ26B08 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC208 z = -2.71
  • chr17:4,173,842 loading 0.0377
  • chr17:4,128,965 loading 0.0376
  • chr17:4,233,511 loading 0.0366
PC113 z = -2.69
  • chr22:17,237,143 loading 0.0474
  • chr22:17,327,096 loading 0.0458
  • chr1:53,531,199 loading 0.0436
PC130 z = 2.68
  • chr6:33,386,202 loading 0.0387
  • chr6:30,876,588 loading 0.0376
  • chr6:30,769,727 loading -0.0372
Ancestry reconstruction error: 0.56
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