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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ27E12_PFZ27E12, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ27E12_PFZ27E12

PFZ27E12_PFZ27E12 is a Golden Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ27E12_PFZ27E12 in the atlas
About PFZ27E12_PFZ27E12

PFZ27E12_PFZ27E12 sits well inside the Golden Retriever cluster - a fairly typical example.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ27E12_PFZ27E12's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ27E12_PFZ27E12's. Click any of them to keep exploring.

  1. PFZ42H06_PFZ42H06 Golden Retriever 21.72
  2. GRLS_grlsEPJAI700 Golden Retriever 27.85
  3. PFZ23B02_PFZ23B02 Golden Retriever 28.12
  4. GRLS_grlsA5ZQQLJJ Golden Retriever 28.23
  5. Oldies_grlscca98e33 Golden Retriever 28.48
PFZ27E12_PFZ27E12's breed

PFZ27E12_PFZ27E12 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 78%
  2. Labrador Retriever 22%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL A/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 6.965
y 11.746
z 7.950
PCA-256 distance from breed centroid
31.31
Outlier percentile in breed
34
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ27E12_PFZ27E12 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC19 z = -2.55
  • chr36:5,342,283 loading 0.0327
  • chr3:69,391,244 loading 0.0300
  • chr25:17,826,837 loading -0.0278
PC145 z = 2.21
  • chr19:19,197,831 loading 0.0370
  • chr1:99,774,502 loading -0.0342
  • chr4:60,708,893 loading 0.0329
PC144 z = -2.19
  • chr17:4,173,842 loading 0.0340
  • chr34:2,125,452 loading 0.0333
  • chr17:4,128,965 loading 0.0327
Ancestry reconstruction error: 0.62
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